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OpenBabel软件支持的文件格式

(2017-08-16 20:30:00)
标签:

openbabel

分子结构

转换

分子格式

pdb

分类: 结构分析

分子结构转换软件OpenBabel2.4.1软件支持的文件格式

作者:shims

Babel命令行模式支持的文件格式非常多,主要有:

  • acr -- Carine ASCI Crystal
  • alc -- Alchemy format
  • arc -- Accelrys/MSI Biosym/Insight II CAR format [Read-only]
  • bgf -- MSI BGF format
  • box -- Dock 3.5 Box format
  • bs -- Ball and Stick format
  • c3d1 -- Chem3D Cartesian 1 format
  • c3d2 -- Chem3D Cartesian 2 format
  • caccrt -- Cacao Cartesian format
  • cache -- CAChe MolStruct format [Write-only]
  • cacint -- Cacao Internal format [Write-only]
  • can -- Canonical SMILES format
  • car -- Accelrys/MSI Biosym/Insight II CAR format [Read-only]
  • ccc -- CCC format [Read-only]
  • cdx -- ChemDraw binary format [Read-only]
  • cdxml -- ChemDraw CDXML format
  • cht -- Chemtool format [Write-only]
  • cif -- Crystallographic Information File
  • cml -- Chemical Markup Language
  • cmlr -- CML Reaction format
  • com -- Gaussian 98/03 Cartesian Input [Write-only]
  • copy -- Copies raw text [Write-only]
  • crk2d -- Chemical Resource Kit 2D diagram format
  • crk3d -- Chemical Resource Kit 3D format
  • csr -- Accelrys/MSI Quanta CSR format [Write-only]
  • cssr -- CSD CSSR format [Write-only]
  • ct -- ChemDraw Connection Table format
  • dmol -- DMol3 coordinates format
  • ent -- Protein Data Bank format
  • fa -- FASTA format [Write-only]
  • fasta -- FASTA format [Write-only]
  • fch -- Gaussian formatted checkpoint file format [Read-only]
  • fchk -- Gaussian formatted checkpoint file format [Read-only]
  • fck -- Gaussian formatted checkpoint file format [Read-only]
  • feat -- Feature format
  • fh -- Fenske-Hall Z-Matrix format [Write-only]
  • fix -- SMILES FIX format [Write-only]
  • fpt -- Fingerprint format [Write-only]
  • fract -- Free Form Fractional format
  • fs -- Open Babel FastSearching database
  • fsa -- FASTA format [Write-only]
  • g03 -- Gaussian 98/03 Output [Read-only]
  • g98 -- Gaussian 98/03 Output [Read-only]
  • gam -- GAMESS Output [Read-only]
  • gamin -- GAMESS Input [Write-only]
  • gamout -- GAMESS Output [Read-only]
  • gau -- Gaussian 98/03 Cartesian Input [Write-only]
  • gjc -- Gaussian 98/03 Cartesian Input [Write-only]
  • gjf -- Gaussian 98/03 Cartesian Input [Write-only]
  • gpr -- Ghemical format
  • gr96 -- GROMOS96 format [Write-only]
  • hin -- HyperChem HIN format
  • inchi -- IUPAC InChI [Write-only]
  • inp -- GAMESS Input [Write-only]
  • ins -- ShelX format [Read-only]
  • jin -- Jaguar input format [Write-only]
  • jout -- Jaguar output format [Read-only]
  • mdl -- MDL MOL format
  • mmd -- MacroModel format
  • mmod -- MacroModel format
  • mol -- MDL MOL format
  • mol2 -- Sybyl Mol2 format
  • molreport -- Open Babel molecule report [Write-only]
  • moo -- MOPAC Output format [Read-only]
  • mop -- MOPAC Cartesian format
  • mopcrt -- MOPAC Cartesian format
  • mopin -- MOPAC Internal
  • mopout -- MOPAC Output format [Read-only]
  • mpc -- MOPAC Cartesian format
  • mpd -- Sybyl descriptor format [Write-only]
  • mpqc -- MPQC output format [Read-only]
  • mpqcin -- MPQC simplified input format [Write-only]
  • nw -- NWChem input format [Write-only]
  • nwo -- NWChem output format [Read-only]
  • pc -- PubChem format [Read-only]
  • pcm -- PCModel format
  • pdb -- Protein Data Bank format
  • pov -- POV-Ray input format [Write-only]
  • pqs -- Parallel Quantum Solutions format
  • prep -- Amber Prep format [Read-only]
  • qcin -- Q-Chem input format [Write-only]
  • qcout -- Q-Chem output format [Read-only]
  • report -- Open Babel report format [Write-only]
  • res -- ShelX format [Read-only]
  • rxn -- MDL RXN format
  • sd -- MDL MOL format
  • sdf -- MDL MOL format
  • smi -- SMILES format
  • sy2 -- Sybyl Mol2 format
  • tdd -- Thermo format
  • test -- Test format [Write-only]
  • therm -- Thermo format
  • tmol -- TurboMole Coordinate format
  • txyz -- Tinker MM2 format [Write-only]
  • unixyz -- UniChem XYZ format
  • vmol -- ViewMol format
  • xed -- XED format [Write-only]
  • xml -- General XML format [Read-only]
  • xyz -- XYZ cartesian coordinates format
  • yob -- YASARA.org YOB format
  • zin -- ZINDO input format [Write-only]

 

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