多肽降解相关蛋白酶及酶切位点
(2010-12-19 16:36:30)
标签:
蛋白酶酶切位点蛋白酶分类教育 |
分类: 多肽科技 |
Human blood is composed of 44% red blood cells,1% white blood cells and 55% plasma(血浆;淋巴液).Plasma consists of 91% water,7% proteins and 2% salts.It contains more than 120 different proteins,including albumin(清蛋白,白蛋白)(HAS),immunoglobulin G(IgG),fibrinogen(血纤维蛋白原)(factor Ⅰ),alpha-2-macroglobulin(巨球蛋白)(α 2M),alpha-1-antitrypsin(抗胰蛋白酶)(A1AT),transferrin(铁传递蛋白)(siderophilin) and lipoproteins and numerous proteolytic enzymes,such as esterases and peptideases.
According to the enzyme classification(E.C.)
( www.biochem.ucl.ac.uk/bsm/enzymes/ec3/index.html, www.ebi.ac.uk/thornton-srv/databases/enzymes/ ).
Numerous human proteolytic enzymes(peptideases) are involved in peptide degradation.The greatest threat to peptides lies in the lumen(管,腔)of the small intestine,which contains gram quantities of peptideases secreted from the pancreas(胰腺)(e.g. α-chymotrypsin(胰凝乳蛋白酶,糜蛋白酶),trypsin(胰朊酶,胰蛋白酶),pancreatic elastase(胰弹性蛋白酶),carboxypeptideases A,B,D,N,and U and so on),as well as cellular peptideases from mucosal cells.The second major enzymatic barrier is the brush border(刷毛边层)membrane of the epithelial(上皮的)cells,which contains at least 15 peptideases(e.g. dipeptidyl-peptidase IV,prolyl tripeptidyl-peptidase,angiotensin-converting enzyme(血管紧张素转化酶),leucyl-aminopeptidase,aminopeptidease M,aminopeptidease A,neprilysin and so on),that together have a broad specificity and can degrade both peptides.Lysosomal (溶酶体的)peptideases(leukocyte elastase(白细胞弹性蛋白酶),cathepsins(组织蛋白酶) B and D and so on) will also target peptides endocytosed by epithelial(上皮的)or endothelial(内皮的)cells. In the matrix metalloproteinase(金属蛋白酶)family(zinc-dependant endopeptidases) known to degrade extracellular matrix proteins,interstitial collagenase(MMP-1,E.C.3.4.24.7) is also able to cleave specific small molecules such as peptides. Amongst proteases,carboxypeptidease C – sometimes referred to as Y(E.C.3.4.16.5) – is the only enzyme that exhibits both the esterase and the amidase activities typical of serine proteases.Many enzymes are also present in different tissues or organs. For example,in brain micro-capillaries,which constitute part of the blood-brain barrier(BBB),gamma-glutamyl transpeptidease(transferase,E.C.2.3.2.2),alkaline phosphatase(碱性磷酸酯酶)(hydrolase,E.C.3.1.3.1),monoamine oxidase(oxidoreductase,E.C.1.4.3.4),catechol-O-methyl transferase(儿茶酚氧位甲基移位酶)(transferase,E.C.2.1.1.6),butyrylcholinesterase(hydrolase(水解酶类),E.C.3.1.1.8) and aromatic-L-amino acid decarboxylase;lyase,are found at high levels.Other enzymes,such as epoxidehydrolase(or epoxide hydrolase;hydrolase,E.C.3.3.2.9,former E.C.3.3.2.3),UDP-glucuronosyl-transferase(glycosyl-transferase),benzyloxyresorufin-O-deethylase(cytochrome(细胞色素)P-450 CYP2B1;oxidoreductase(氧化还原酶)and glutathione-S-transferase are also found bound to brain micro-capillaries at high levels.The protein-disulfide reductase(oxidoreductase),which enalbles disulfide bridge cleavage by reduction in dithiol,is also abundant in the brain and can alter peptides structures stable in plasma.
Proteolytic peptide degradation,which results in short half-life(generally,a few minutes or ,at best,a few hours), can be countered in various ways,in particular by using new synthetic strategies for limiting metabolism and alternative routes of administration.
Table 1 Most important human proteolytic enzymes involved in peptide degradation
Enzymes |
E.C. Number |
Cleavage sites |
Serine proteases |
E.C.3.4.21. |
|
α-chymotrypsin(胰凝乳蛋白酶,糜蛋白酶) |
E.C.3.4.21.1 |
Tyr-|-Xaa, Trp-|-Xaa, Phe-|-Xaa, and also Leu-|-Xaa, Met-|-Xaa, |
Trypsin (胰朊酶,胰蛋白酶) |
E.C.3.4.21.4 |
Arg-|-Xaa, Lys-|-Xaa, |
Pancreatic elastase(胰弹性蛋白酶) |
E.C.3.4.21.36 |
Ala-|-Xaa,and also Gly-|-Xaa, Val-|-Xaa, Ser-|-Xaa, |
Thrombin(凝血酶) |
E.C.3.4.21.5 |
Arg-|-Gly, |
Plasmin(胞质素,胞浆素) |
E.C.3.4.21.7 |
Lys-|-Xaa,> Arg-|-Xaa |
Prolyl oligopeptidase,or prolyl endopeptidase |
E.C.3.4.21.26 |
Pro-|-Xaa,>> Ala-|-Xaa |
Plasma kallikrein(血浆激肽释放酶) |
E.C.3.4.21.34 |
Arg-|-Xaa, Lys-|-Xaa,including Arg-|-Ser, Lys-|-Arg, |
Leukocyte elastase(白细胞弹性蛋白酶 ),or neutrophil elastase(中性白细胞弹性蛋白酶),or lysosomal elastase(溶酶体弹性蛋白酶) |
E.C.3.4.21.37 |
Val-|-Xaa, Ala-|-Xaa, |
Cysteine proteases |
E.C.3.4.22. |
|
Cathepsin B(组织蛋白酶) |
E.C.3.4.22.1 |
Arg-Arg-|-Xaa, and also Leu-|-Xaa, Ala-|-Xaa, Phe-|-Xaa, Trp-|-Xaa, |
Clostripain(梭菌蛋白酶),or endoproteinase Arg-C |
E.C.3.4.22.8 |
Arg-|-Xaa including Arg-|-Pro,but not Lys-|-Xaa |
Calpain(钙激活中性蛋白酶)-1,or μ-calpain |
E.C.3.4.22.52 |
Met-|-Xaa, Tyr-|-Xaa and Arg-|-Xaa(with Leu or Val as the P2 residue) |
Aspartic acid proteases |
E.C.3.4.23. |
|
Pepsin(胃朊酶,胃蛋白酶) |
E.C.3.4.23.1 |
Preferentially Phe-|-Xaa, Tyr-|-Xaa, and also Leu-|-Xaa,and Trp-|-Xaa,,ideally with Xaa= Phe,Trp,or Tyr |
Cathepsin(组织蛋白酶)D |
E.C.3.4.23.5 |
Preferentially Phe-|-Xaa, Tyr-|-Xaa, and also Leu-|-Xaa, ideally with Xaa ≠ Ala or Val |
Metalloproteases |
E.C.3.4.24. |
|
Neprilysin(脑啡肽酶),or enkephalinase(脑啡肽酶),or neutral endopeptidase |
E.C.3.4.24.11 |
Xaa-|-Tyr, Xaa-|-Phe, Xaa-|-Trp, and Xaa-|-Leu, |
Thimet oligopeptidase(甲拌磷寡肽酶),or endo-oligopeptidase A,or endopeptidase(肽链内切酶)24.15,or pz-peptidease(肠促胰酶素) |
E.C.3.4.24.15 |
Xaa-|-Arg, Xaa-|-Ser, Xaa-|-Ile, Xaa-|-Ala, Xaa-|-Gly, |
Aminopeptidases |
E.C.3.4.11. |
N-term |
Leucyl-aminopeptidase |
E.C.3.4.11.1 |
Preferentially Leu-|-Xaa,but not Arg-|-Xaa,and Lys-|-Xaa, |
Aminopeptidase M or N,or alanyl- aminopeptidase,or membrane alanine aminopeptidase |
E.C.3.4.11.2 |
Preferentially Ala-|-Xaa,and Tyr-|-Xaa,if Yaa-Pro-|-Xaa in term with Yaa = Ala,Val,Leu,Ile,Phe,Tyr or Trp,then the dipeptide Yaa-Pro could be released |
Aminopeptidase B |
E.C.3.4.11.6 |
Arg-|-Xaa, Lys-|-Xaa, |
Aminopeptidase A,or angiotensinase,or glutamyl-aminopeptidase |
E.C.3.4.11.7 |
Glu-|-Xaa>> Asp-|-Xaa, |
Dipeptidyl-peptidases and tripeptidyl-peptidases |
E.C.3.4.14. |
N-term(di-and tripeptides) |
Dipeptidyl-peptidase I,or cathepsin(组织蛋白酶) C or J |
E.C.3.4.14.1 |
Xaa-Yaa-|-Zaa,if Xaa ≠ Arg or Lys,or
Yaa |
Dipeptidyl-peptidase IV |
E.C.3.4.14.5 |
Preferentially Xaa-Pro-|-Zaa,(but also Xaa-Ala-|-Yaa) with Yaa ≠ Pro or Hyp |
Prolyl tripeptyl-peptidase |
E.C.3.4.14.12 |
Xaa-Yaa-Pro-|-Zaa,if Zaa ≠ Pro |
Peptidyl-Dipeptidases |
E.C.3.4.15. |
C-term |
Peptidyl-depeptidase A, or angiotensin-converting enzyme |
E.C.3.4.15.1 |
Xaa-|-Yaa-Zaa,if Yaa ≠ Pro or Zaa ≠ Asp or Glu |
Metallo-carboxypeptidases |
E.C.3.4.17. |
C-term |
Carboxypeptidase A |
E.C.3.4.17.1 |
Xaa-|-Yaa if Yaa ≠ Asp,Glu,Arg,Lys or Pro |
Carboxypeptidase B,or protaminase |
E.C.3.4.17.2 |
Xaa-|-Arg and Xaa-|-Lys |
Carboxypeptidase N,or Lysine(arginine), Carboxypeptidase(羧基肽酶),or kininase I(激肽酶) |
E.C.3.4.17.3 |
Xaa-|-Lys>> Xaa-|-Arg |
Carboxypeptidase U or R |
E.C.3.4.17.20 |
Xaa-|-Arg and Xaa-|-Lys |
Glutamate Carboxypeptidase II,or folate hydrolase |
E.C.3.4.17.21 |
Xaa-|-Glu,preferentially with Xaa= Asp or Glu |