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多肽降解相关蛋白酶及酶切位点

(2010-12-19 16:36:30)
标签:

蛋白酶

酶切位点

蛋白酶分类

教育

分类: 多肽科技

Human blood is composed of 44% red blood cells,1% white blood cells and 55% plasma(血浆;淋巴液).Plasma consists of 91% water,7% proteins and 2% salts.It contains more than 120 different proteins,including albumin(清蛋白,白蛋白)(HAS),immunoglobulin G(IgG),fibrinogen(血纤维蛋白原)(factor ),alpha-2-macroglobulin(巨球蛋白)(α 2M),alpha-1-antitrypsin(抗胰蛋白酶)(A1AT),transferrin(铁传递蛋白)(siderophilin) and lipoproteins and numerous proteolytic enzymes,such as esterases and peptideases.

 

According to the enzyme classification(E.C.)

( www.biochem.ucl.ac.uk/bsm/enzymes/ec3/index.html, www.ebi.ac.uk/thornton-srv/databases/enzymes/ ).

Numerous human proteolytic enzymes(peptideases) are involved in peptide degradation.The greatest threat to peptides lies in the lumen(,)of the small intestine,which contains gram quantities of peptideases secreted from the pancreas()(e.g. α-chymotrypsin(胰凝乳蛋白酶,糜蛋白酶),trypsin(胰朊酶,胰蛋白酶),pancreatic elastase(胰弹性蛋白酶),carboxypeptideases A,B,D,N,and U and so on),as well as cellular peptideases from mucosal cells.The second major enzymatic barrier is the brush border(刷毛边层)membrane of the epithelial(上皮的)cells,which contains at least 15 peptideases(e.g. dipeptidyl-peptidase IV,prolyl tripeptidyl-peptidase,angiotensin-converting enzyme(血管紧张素转化酶),leucyl-aminopeptidase,aminopeptidease M,aminopeptidease A,neprilysin and so on),that together have a broad specificity and can degrade both peptides.Lysosomal (溶酶体的)peptideases(leukocyte elastase(白细胞弹性蛋白酶),cathepsins(组织蛋白酶) B and D and so on) will also target peptides endocytosed by epithelial(上皮的)or endothelial(内皮的)cells. In the matrix metalloproteinase(金属蛋白酶)family(zinc-dependant endopeptidases) known to degrade extracellular matrix proteins,interstitial collagenase(MMP-1,E.C.3.4.24.7) is also able to cleave specific small molecules such as peptides. Amongst proteases,carboxypeptidease C – sometimes referred to as Y(E.C.3.4.16.5) – is the only enzyme that exhibits both the esterase and the amidase activities typical of serine proteases.Many enzymes are also present in different tissues or organs. For example,in brain micro-capillaries,which constitute part of the blood-brain barrier(BBB),gamma-glutamyl transpeptidease(transferase,E.C.2.3.2.2),alkaline phosphatase(碱性磷酸酯酶)(hydrolase,E.C.3.1.3.1),monoamine oxidase(oxidoreductase,E.C.1.4.3.4),catechol-O-methyl transferase(儿茶酚氧位甲基移位酶)(transferase,E.C.2.1.1.6),butyrylcholinesterase(hydrolase(水解酶类),E.C.3.1.1.8) and aromatic-L-amino acid decarboxylase;lyase,are found at high levels.Other enzymes,such as epoxidehydrolase(or epoxide hydrolase;hydrolase,E.C.3.3.2.9,former E.C.3.3.2.3),UDP-glucuronosyl-transferase(glycosyl-transferase),benzyloxyresorufin-O-deethylase(cytochrome(细胞色素)P-450 CYP2B1;oxidoreductase(氧化还原酶)and glutathione-S-transferase are also found bound to brain micro-capillaries at high levels.The protein-disulfide reductase(oxidoreductase),which enalbles disulfide bridge cleavage by reduction in dithiol,is also abundant in the brain and can alter peptides structures stable in plasma.

 

Proteolytic peptide degradation,which results in short half-life(generally,a few minutes or ,at best,a few hours), can be countered in various ways,in particular by using new synthetic strategies for limiting metabolism and alternative routes of administration.

 

Table 1 Most important human proteolytic enzymes involved in peptide degradation

 

Enzymes

E.C. Number

Cleavage sites

Serine proteases

E.C.3.4.21.

 

α-chymotrypsin(胰凝乳蛋白酶,糜蛋白酶)

E.C.3.4.21.1

Tyr-|-Xaa, Trp-|-Xaa, Phe-|-Xaa, and also Leu-|-Xaa, Met-|-Xaa,

Trypsin (胰朊酶,胰蛋白酶)

E.C.3.4.21.4

Arg-|-Xaa, Lys-|-Xaa,

Pancreatic elastase(胰弹性蛋白酶)

E.C.3.4.21.36

Ala-|-Xaa,and also Gly-|-Xaa, Val-|-Xaa, Ser-|-Xaa,

Thrombin(凝血酶)

E.C.3.4.21.5

Arg-|-Gly,

Plasmin(胞质素,胞浆素)

E.C.3.4.21.7

Lys-|-Xaa,> Arg-|-Xaa

Prolyl oligopeptidase,or prolyl endopeptidase

E.C.3.4.21.26

Pro-|-Xaa,>> Ala-|-Xaa

Plasma kallikrein(血浆激肽释放酶)

E.C.3.4.21.34

Arg-|-Xaa, Lys-|-Xaa,including Arg-|-Ser, Lys-|-Arg,

Leukocyte elastase(白细胞弹性蛋白酶

),or neutrophil elastase(中性白细胞弹性蛋白酶),or lysosomal elastase(溶酶体弹性蛋白酶)

E.C.3.4.21.37

Val-|-Xaa, Ala-|-Xaa,

Cysteine proteases

E.C.3.4.22.

 

Cathepsin B(组织蛋白酶)

E.C.3.4.22.1

Arg-Arg-|-Xaa, and also Leu-|-Xaa, Ala-|-Xaa, Phe-|-Xaa, Trp-|-Xaa,

Clostripain(梭菌蛋白酶),or endoproteinase Arg-C

E.C.3.4.22.8

Arg-|-Xaa including Arg-|-Pro,but not Lys-|-Xaa

Calpain(钙激活中性蛋白酶)-1,or μ-calpain

E.C.3.4.22.52

Met-|-Xaa, Tyr-|-Xaa and Arg-|-Xaa(with Leu or Val as the P2 residue)

Aspartic acid proteases

E.C.3.4.23.

 

Pepsin(胃朊酶,胃蛋白酶)

E.C.3.4.23.1

Preferentially Phe-|-Xaa, Tyr-|-Xaa, and also Leu-|-Xaa,and Trp-|-Xaa,,ideally with Xaa= Phe,Trp,or Tyr

Cathepsin(组织蛋白酶)D

E.C.3.4.23.5

Preferentially Phe-|-Xaa, Tyr-|-Xaa, and also Leu-|-Xaa, ideally with Xaa ≠ Ala or Val

Metalloproteases

E.C.3.4.24.

 

Neprilysin(脑啡肽酶),or enkephalinase(脑啡肽酶),or neutral endopeptidase

E.C.3.4.24.11

Xaa-|-Tyr, Xaa-|-Phe, Xaa-|-Trp, and Xaa-|-Leu,

Thimet oligopeptidase(甲拌磷寡肽酶),or endo-oligopeptidase A,or endopeptidase(肽链内切酶)24.15,or pz-peptidease(肠促胰酶素)

E.C.3.4.24.15

Xaa-|-Arg, Xaa-|-Ser, Xaa-|-Ile, Xaa-|-Ala, Xaa-|-Gly,

Aminopeptidases

E.C.3.4.11.

N-term

Leucyl-aminopeptidase

E.C.3.4.11.1

Preferentially Leu-|-Xaa,but not Arg-|-Xaa,and Lys-|-Xaa,

Aminopeptidase M or N,or alanyl- aminopeptidase,or membrane alanine aminopeptidase

E.C.3.4.11.2

Preferentially Ala-|-Xaa,and Tyr-|-Xaa,if Yaa-Pro-|-Xaa in term with Yaa = Ala,Val,Leu,Ile,Phe,Tyr or Trp,then the dipeptide Yaa-Pro could be released

Aminopeptidase B

E.C.3.4.11.6

Arg-|-Xaa, Lys-|-Xaa,

Aminopeptidase A,or angiotensinase,or glutamyl-aminopeptidase

E.C.3.4.11.7

Glu-|-Xaa>> Asp-|-Xaa,

Dipeptidyl-peptidases and tripeptidyl-peptidases

E.C.3.4.14.

N-term(di-and tripeptides)

Dipeptidyl-peptidase I,or cathepsin(组织蛋白酶) C or J

E.C.3.4.14.1

Xaa-Yaa-|-Zaa,if Xaa ≠ Arg or Lys,or Yaa  ≠ Pro,or Zaa ≠ Pro

Dipeptidyl-peptidase IV

E.C.3.4.14.5

Preferentially Xaa-Pro-|-Zaa,(but also Xaa-Ala-|-Yaa) with Yaa ≠ Pro or Hyp

Prolyl tripeptyl-peptidase

E.C.3.4.14.12

Xaa-Yaa-Pro-|-Zaa,if Zaa ≠ Pro

Peptidyl-Dipeptidases

E.C.3.4.15.

C-term

Peptidyl-depeptidase A, or angiotensin-converting enzyme

E.C.3.4.15.1

Xaa-|-Yaa-Zaa,if Yaa ≠ Pro or Zaa ≠ Asp or Glu

Metallo-carboxypeptidases

E.C.3.4.17.

C-term

Carboxypeptidase A

E.C.3.4.17.1

Xaa-|-Yaa if Yaa ≠ Asp,Glu,Arg,Lys or Pro

Carboxypeptidase B,or protaminase

E.C.3.4.17.2

Xaa-|-Arg and Xaa-|-Lys

Carboxypeptidase N,or Lysine(arginine), Carboxypeptidase(羧基肽酶),or kininase I(激肽酶)

E.C.3.4.17.3

Xaa-|-Lys>> Xaa-|-Arg

Carboxypeptidase U or R

E.C.3.4.17.20

Xaa-|-Arg and Xaa-|-Lys

Glutamate Carboxypeptidase II,or folate hydrolase

E.C.3.4.17.21

Xaa-|-Glu,preferentially with Xaa= Asp or Glu

 

 

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